Beck M.L., Price J.O. (1981) Genetic variation in the terrestrial isopod, Armadillidium vulgare. Journal of Heredity, 72: 15–18. |
Beck M.L., Price J.O. (1985) Genetic variation and differentiation in Armadillidium vulgare (Isopoda: Oniscoidea) Genetica, 66: 169–171. |
Becking T., Giraud I., Raimond M., Moumen B., Chandler C., Cordaux R., Gilbert C. (2017) Diversity and evolution of sex determination systems in terrestrial isopods. Scientific Reports, 7: 1–39. |
Bedek J., Taiti S., Bilandžija H., Ristori E., Baratti M. (2019) Molecular and taxonomic analyses in troglobiotic Alpioniscus (Illyrionethes) species from the Dinaric Karst (Isopoda: Trichoniscidae). Zoological Journal of the Linnean Society, 187: 539–584. |
Cooper S., Saint K., Taiti S., Austin A., Humphreys W. (2008) Subterranean archipelago; mitochondrial DNA phylogeography of stygobitic isopods (Oniscidea: Haploniscus) from the Yilgarn region of Western Australia. Invertebrate Systematics, 22: 195–203. |
Delhoumi M., Zaabar W., Bouslama M.F., Zayani D., Achouri M.S. (2019) High level of genetic variation in mitochondrial 16S rDNA among populations of Porcellionides pruinosus (Brandt, 1833) (Crustacea: Isopoda: Oniscidea) in Tunisia. The European Zoological Journal, 86: 1–10. |
Dimitriou A., Taiti S., Sfenthourakis S. (2019) Genetic evidence against monophyly of Oniscidea implies a need to revise scenarios for the origin of terrestrial isopods. Scientific Reports, 9: 18508. |
Doublet V., Raimond R., Grandjean F, Lafitte A, Souty-Grosset C., Marcadé I. (2012) Widespread atypical mitochondrial DNA structure in isopods (Crustacea, Peracarida) related to a constitutive heteroplasmy in terrestrial species. Genome, 55: 234–244. |
Eberl R. (2013) Phylogeography of the high intertidal isopod Ligia pallasii Brandt, 1833 (Isopoda: Oniscidea) from the Aleutian Islands to Monterey Bay. Journal of Crustacean Biology, 33: 253–264. |
Garthwaite R.L., Lawson R., Sassaman C. (1995) Population genetics of Armadillidium vulgare in Europe and North America. In: Terrestrial Isopod Biology (Alikhan M.A. Ed.), pp.145–199, A.A. Balkema. |
Gentile G., Allegrucci G. (1999) Geographic variation and genetic relationships in populations of the Androniscus dentiger complex from Central Italy (Isopoda, Oniscidea, Trichoniscidae). International Journal of Speleology, 26: 47–61. |
Gentile G., Campanaro A., Carosi M., Sbordoni V., Argano R. (2010) Phylogeography of Helleria brevicornis Ebner 1868 (Crustacea, Oniscidea): Old and recent differentiations of an ancient lineage. Molecular Phylogenetics and Evolution, 54: 640–646. |
Gentile G., Sbordoni V. (1998) Indirect methods to estimate gene flow in cave and surface populations of Androniscia dentiger (Isopoda: Oniscidea). Evolution, 52: 432–442. |
Gongalsky K., Nefediev P., Turbanov I. (2021) A new species of the genus Lucasioides Kwon, 1993 (Isopoda, Oniscidea, Agnaridae) from Siberia, Russia. Zootaxa, 4903: 140–150. |
Gongalsky K., Turbanov I., Medvedev D., Volkova J. (2018) Description of a new species of the genus Protracheoniscus Verhoeff, 1917 and redescription of Protracheoniscus kryszanovskii Borutzky, 1957 from the southeast of European Russia (Isopoda, Oniscidea, Agnaridae). Zookeys, 801: 189–205. |
Greenan T., Griffiths C., Santamaria C. (2018) Molecular approaches uncover cryptic diversity in intertidal Ligia isopods (Crustacea, Isopoda, Ligiidae) across the southern Africa coastline. PeerJ, 6: e4658. |
Hurtado L., Lee E., Mateos M., Taiti S. (2014) Global Diversification at the Harsh Sea-Land Interface: Mitochondrial Phylogeny of the Supralittoral Isopod Genus Tylos (Tylidae, Oniscidea). PLoS ONE, 9: e94081. |
Hurtado L., Mateos M., Santamaria C. (2010) Phylogeography of supralittoral rocky intertidal Ligia Isopods in the Pacific region from central California to central Mexico. PLoS ONE, 5: e11633. |
Hurtado L., Mateos M., Wang C., Santamaria C., Jung J., Khalaji-Pirbalouty V., Kim W. (2018) Out of Asia: mitochondrial evolutionary history of the globally introduced supralittoral isopod Ligia exotica. PeerJ, 6: e4337. |
Javidkar M., Cooper S.J.B., King R.A., Humphreys W.F., Bertozzi T., Stevens M.I., Austin A.D. (2016) Molecular systematics and biodiversity of oniscidean isopods in the groundwater calcretes of central Western Australia. Molecular Phylogenetics and Evolution, 104: 83–98. |
Jung J., Eo H.-S., Rho H.S., Kim W. (2008) Two genetic lineages of sea slaters, Ligia (Crustacea: Isopoda) in South Korea: a population genetic approach. Molecules and Cells, 25: 523–530. |
Karasawa S. (2016) Eleven nominal species of Burmoniscus are junior synonyms of B. kathmandius (Schmalfuss, 1983) (Crustacea, Isopoda, Oniscidea). ZooKeys, 607: 1–24. |
Karasawa S., Goto K. (2014) Burmoniscus kitadaitoensis Nunomura, 2009 (Crustacea, Isopoda, Oniscidea) from southern Japan, a junior synonym of B. meeusei (Holthuis, 1947). ZooKeys, 386: 21–28. |
Karasawa S., Honda M. (2012) Taxonomic study of the Burmoniscus ocellatus complex (Crustacea, Isopoda, Oniscidea) in Japan shows genetic diversification in the southern Ryukyus, southwestern Japan. Zoological Science, 29: 527–537. |
Karasawa S., Iwasaki T., Nakajima J. (2017) DNA barcoding identified the exotic terrestrial isopod Porcellio scaber (Crustacea, Isopoda, Oniscidea) on the Kyushu mainland, western Japan. Journal of Field Science, 15: 29–34. |
Karasawa S., Kanazawa Y., Kubota K. (2014) Redefinitions of Spherillo obscurus (Budde-Lund, 1885) and S. dorsalis (Iwamoto, 1943) (Crustacea: Oniscidea: Armadillidae), with DNA markers for identification. Edaphologia, 93: 11–27. |
Klossa-Kilia E., Kilias G., Sfenthourakis S. (2005) Increased genetic diversity in Greek populations of the genus Ligidium (Crustacea: Isopoda: Oniscidea) revealed by RELP analysis of mtDNA segments. Contributions to Zoology, 74: 255–264. |
Klossa-Kilia E., Kilias G., Tryfonopoulos G., Koukou K., Sfenthourakis Parmakelis A. (2006) Molecular phylogeny of the Greek populations of the genus Ligidium (Isopoda, Oniscidea) using three mtDNA gene segments. Zoologica Scripta, 35: 459–472. |
Niikura M., Honda M., Yahata K. (2015) Phylogeography of semiterrestrial isopod, Tylos granuliferus, on east Asian coasts. Zoological Science, 32: 105–113. |
伊谷結 (1999) ミトコンドリアDNAに基づいた日本産フナムシ属の系統解析. 昆虫と自然, 34: 39–41. |
伊谷結 (2000) 分子系統解析に基づく日本産フナムシ類 (等脚目: 甲殻亜門) の系統生物地理. 月刊海洋, 32: 246–251. |
Kilpert F. (2010) Molecular markers of the mitochondrial genomes of isopoda and implications on the phylogeny of peracarida (crustacea: malacostraca). Doctoral thesis. [including many primers, but the pairs were unclear]
Kilpert F., Podsiadlowski L. (2006) The complete mitochondrial genome of the common sea slater, Ligia oceanica (Crustacea, Isopoda) bears a novel gene order and unusual control region features. BMC Genomics, 7: 241. [including many primers, but the pairs were unclear]
Kilpert F., Held C., Padsiadlowski L. (2012) Multiple rearrangements in mitochondrial genomes of Isopoda and phylogenetic implications. Molecular Phylogenetics and Evolution, 64: 106–117. [including many primers, but the pairs were unclear]
12S aih1: GGATTAGATACCCTACTATTTATAAAC
12S bih1: GACGGGCGATGTGTACTTATTC
12SCRF: GAGAGTGACGGGCGATATGT
12SCRR: AAACCAGGATTAGATACCCTATTAT
12Sai: AAACTAGGATTAGATACCCTATTAT
12Sbi: AAGAGCGACGGGCGATGTGT
16S F: CGGTTTGAACTCAAATCATGTG
16S R: GCCTGTTTAACAAAAACATC
16S Tyhe-F: ATATTGACTGTGCTAAGGTAGC
16S Tyhe-R: CTTAATCCAACATCGAGGTC
16S tyhefor: ATATTGACTGTGCTAAGGTAGC
16S tyherev: CTTAATCCAACATCGAGGTC
16S2: GCGACCTCGATGTTGGATTAA
16SAR-SF: CGCCTGTTTATCAAAAACAT
16SBR-SF: CCGGTTTGAACTCAGATCATG
16SH2: AGATAGAAACCAACCTGG
16Sar: CGCCTGTTTATCAAAAACAT
16Sar-int-sf: GCCGCAGTATHCTRACTGTGCT
16Sbr: CCGGTCTGAACTCAGATCACGT
16s SAR: CGCCTGTTTATCAAAAACAT
16s SBR: CCGGTCTGAACTCAGATCACGT
16s TA: CTGTGCTAAGGTAGCRTAAT
16s TB: TTAARRGTCGAACAGAC
18Aimod: noData
18S614r: TCCAAC TACGAGCTTTTTAACC
18Sforward: TACCTGGTTGATCCTGCCAG
18s1.2F: TGCTTGTCTCAAAGATTAAGC
18sb5.0: TAACCGCAACAACTTTAAT
28sa: GACCCGTCTTGAAACACGGA
28sb: TCGGAAGGAACCAGCTACTA
28srD1.2a: CCCSSGTAATTTAAGCATATTA
28srd4.2b: CCTTGGTCCGTGTTTCAAGACGG
700 R: CGCGGCTGCTGGCACCAGCAC
C1-J-2329 (alias K525): ACTGTAAATATATGATGAGCTCA
COI-F: TCWACNAAYCAYAARGAYATTGG
COI-R: ACYTCNGGRTGNCCRAARARYCA
COIarch1: GGTCAACAAATCATAAAGAYATYGG
COIarch2: TAAACTTCAGGGTGACCAAAAAATCA
CYTOB2_F: AATTGGAAGTGARGAAGCAGCA
CYTOB2_R: TTACRGACTGAACWGATGARGCW
Crust-12f: CAGCAKYCGCGGTTAKAC
Crust-12r: ACACCTACTWTGTTACGACTTATCTC
Cytb144F: TGAGSNCARATGTCNTWYTG
Cytb151F: TGTGGRGCNACYGTWATYACTAA
Cytb270R: AANAGGAARTAYCAYTCNGGYTG
Cytb272R: GCRAANAGRAARTACCAYTC
D-forward: TGTGATGCCCTTAGA
D-reverse: TCTAAGGGCATCACA
D3A: GACCCGTCTTGAAACACGGA
D3B: TCGGAAGGAACCAGCTACTA
FLO-HCO: GGRTGYCCAAARAATCA
G2281: GSGATGCCGCGTWTGGGAGN
G2282: TTCACCGTCBVAGAGGCCGT
G2328: GTGCCACYGCCAAACCT
G2329: CCATRCCCCAACCTSCTGT
G2340: GATCGTGTWTAYGAAGTYGGAAG
G2341: TCAAGAGCRGTACARWAGTTTTC
GROW42_F: YTTRGGKCTTGGAGCMCTGT
GROW42_R: AGGACCTCCCCARCTCAAGA
H3AF: ATGGCTCGTACCAAGCAGACVGC
H3AR: ATATCCTTRGGCATRATRGTGAC
H7005mod1: ARTGNGCANCANCRTARTANGTRTCRTG
HCO2198: TAAACTTCAGGGTGACCAAAAAATCA
HCO2198_t1: CAGGAAACAGCTATGACTAAACTTCAGGGTGACCAAAAAATCA
I-forward: AAACTTAAAGGAATTGACGGA
I-reverse: TCCGTCAATTCCTTTAAGTTT
INN2_F: GCAGCTCTTTYTGGTKGACAG
INN2_R: AAGCGTGAAGCCCTTCTTTG
ISOPOD F1: ATTCTACCAACCATAAGGATATTGG
ISOPOD R1: TCAAAAAAAGATGTATTTAAGTTTCG
LCO1490: GGTCAACAAATCATAAAGATATTGG
LCO1490: GGTCAACAAATCATAAAGATATTGGGG
LCO1490_t1: TGTAAAACGACGGCCAGTGGTCAACAAATCATAAAGATATTGG
LSUF: CGCCTGTTTAACAAAGACAT
LSUR: TCGGTCTGAACTGAACTCAGATCACGT
M13FLCO-1490: TGTAAAACGACGGCCAGTGGTCAACAAATCATAAAGATATTGG
M13RHCO-2198: CAGGAAACAGCTATGACTAAACTTCAGGGTGACCAAAAAATCA
M876: CARTTYCCAAAMCCNCCAATTA
M877: AATTTTATTACAACTRTRATHAATATRCG
METH24_F: TCTTGTTCGCAGCCAAARAYT
METH24_R: TGGGCATGGATAMCCRTTAAG
N4: GGAGCTTCAACATGAGCTTT
N4-specific2: CYCCRWCYTGGAGKCWYTCSGGY
NADH19_F: GATTCCWCCTCTGCTYTGGT
NADH19_R: GAYTCTCGCTTGACCCAATCM
NAK 638 R: noData
NAK for-b: noData
NAK for-b: ATGACAGTTGCTCATATGTGGTT
NAK rev2: noData
NAK rev2: ATAGGGTGATCTCCAGTRACCAT
NaKFb: noData
NaKR2: noData
PEPCK 545 R: noData
PEPCKfor: noData
PEPCKrev: noData
PROT44_F: AAGCAGGRATTWTGGSTYTGG
PROT44_R: RATGGCATTTGCAGTRGTWCG
RIB46_F: GAACCWTATGTGCCYCCMGA
RIB46_R: GKAYACGCCACAACCCRTA
UBI4_F: GAAACTTCTGGGGATTGAAGCAC
UBI4_R: ACCGGYWGGCATTTGATTGA
VATP10_F: GATCCAGCGTCCRCTTCARG
VATP10_R: CTCCRCAACCCACGTACACA
XAA6_F: GCTGAAAAAGYRTGGGTTGGA
XAA6_R: AAKCMTGRTCTGGGATATAAGM
crust-12Sf: CAGCAKYCGCGGTTAKAC
crust-12Sr: ACACCTACTWTGTTACGACTTATCTC
heCOIfor: TCCTTTAGCTTCAAATATTGC
heCOIrev: CATAATGGAAATGAGCTACAAC
noData: noData
Directed by Shigenori Karasawa (Tottori University: dojyoudoubutu (a) gmail.com)